PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000979.1_g000010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 145aa MW: 16327.8 Da PI: 4.9966 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 37.7 | 3.6e-12 | 32 | 120 | 4 | 96 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldg 86 +lt+s+v + ++ +p k ++ s ++ + +sWe+++ + +++ + + W+ Fv++n Lk+gD ++F+l+g Rmu_sc0000979.1_g000010.1 32 ILTKSHVKPLYQMEIPAKLD-P-VLPAGAS-VPMVLNFGDKSWEMTY--NETKRLkLMDRHSWRAFVDDNSLKAGDGCIFELTG 110 55666666666666665543.1.1222222.335677888*******..665554488889********************997 PP SSEE..EEEE CS B3 87 rsefelvvkv 96 ++++ v+kv Rmu_sc0000979.1_g000010.1 111 CDSTKVVFKV 120 6666555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MEDSAQSRAT PTIELHGDEF WPLSGKPFFD IILTKSHVKP LYQMEIPAKL DPVLPAGASV 60 PMVLNFGDKS WEMTYNETKR LKLMDRHSWR AFVDDNSLKA GDGCIFELTG CDSTKVVFKV 120 QILRGDIPAE LVEKYSGEVE KPIII |