PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000976.1_g000023.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 151aa    MW: 16580.7 Da    PI: 8.5166
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000976.1_g000023.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.0018122144123
                                EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                ++C+ C+k+F ++  L  H  +H
  Rmu_sc0000976.1_g000023.1 122 FECSSCKKVFGSHQALGGHRASH 144
                                89************999999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MGREMNFPKN RPKSAKKPDP AAPKITTPCS ECGRKFWSWK ALFGHMRCHP ERHWRGIQPP  60
PDFQPAGSPP NPVLPDLELS MSEDDHDAAS SLLILASGTD QTQLPGTSSQ GLRENDSGGC  120
RFECSSCKKV FGSHQALGGH RASHRLIFNS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.16e-44C2H2 family protein