PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000950.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 313aa    MW: 35301.5 Da    PI: 8.1165
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000950.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.9e-18141191155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr++  +++Wv+e+r+p   +k++r++lg++ t e+Aa+a++ a+++l+g
  Rmu_sc0000950.1_g000005.1 141 PVYRGVRRRN-NNKWVCEVREP---NKKTRIWLGTYPTLEMAARAHDVAALALRG 191
                                68*****887.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MSSTAQVAAT SLASHRVLSC PVYECTGSTS NLMYISPPTR RFCFISLFPR TQSTKKTKLT  60
LPSAKKTKPA LLQMNSSYQF SDSNQQSLES VSSIDKPESS SLSDTSFTTR RSPHSDGAVI  120
LASSRPKKRA GRRVFKETRH PVYRGVRRRN NNKWVCEVRE PNKKTRIWLG TYPTLEMAAR  180
AHDVAALALR GKQACLNFAD SVWRLPIPAS KDQLDIRRAA AEAAETFRPE EFGGVSSSCD  240
DNEREYEDEN VEMDNEKKND GFYEDEEGLF DMPRLLTSMA EGPLLSPPRH YLDSMNWADD  300
QVDSESNFSL WSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-53ERF family protein