PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000861.1_g000047.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 134aa MW: 14705.5 Da PI: 10.5323 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 92.8 | 7.3e-29 | 47 | 111 | 1 | 65 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 a+g+kdrhsk++T++g+Rd Rv l a++a++f+d+qd+LG+d++sk ++WL+++ k+a e++ Rmu_sc0000861.1_g000047.1 47 ATGRKDRHSKVCTAKGPRDHRVQLAAHTAIQFYDVQDQLGYDRPSKSVDWLIKKVKAANNEMPPW 111 589*******************************************************9999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MGESHNNLHH RAMTSFFAAS RLGLGIRTAS SSTASEIVEA RGHILRATGR KDRHSKVCTA 60 KGPRDHRVQL AAHTAIQFYD VQDQLGYDRP SKSVDWLIKK VKAANNEMPP WNPNSISVQT 120 TSSLTVPISA AQDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 2e-40 | TCP family protein |