PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000837.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family VOZ
Protein Properties Length: 472aa    MW: 52928.7 Da    PI: 7.113
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000837.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ3591.9e-1102284383217
                        VOZ   3 psaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaata 86 
                                  +flgp calwdc+rp++     +dyc +fhat al+eg+pg +pv+rp+gi+lkd++lf+al a  qgk vgip+cegaat 
  Rmu_sc0000837.1_g000011.1 228 EPSFLGPTCALWDCSRPVE---CGKDYCCNFHATSALEEGQPGKSPVFRPRGISLKDNALFDALIAWNQGKAVGIPNCEGAATL 308
                                557**************86...5689********************************************************** PP

                        VOZ  87 kspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhly 170
                                kspwn ++lf+ls+leget+rewlffdkprraf +gnr+qrslpd+sgrgwhesrkq+mkef+g+krsyymdpqps   +whl+
  Rmu_sc0000837.1_g000011.1 309 KSPWNDSKLFNLSFLEGETVREWLFFDKPRRAFGTGNRRQRSLPDHSGRGWHESRKQIMKEFDGQKRSYYMDPQPSIDQDWHLF 392
                                ************************************************************************************ PP

                        VOZ 171 eyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                                eye+n++da+alyrlelk    kks+kgkvs+  +adlqkk+g+lta
  Rmu_sc0000837.1_g000011.1 393 EYEVNNSDACALYRLELKFGIVKKSPKGKVSN-EVADLQKKMGKLTA 438
                                ******************************86.59**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MILPAVKLGT LALKTFCKPI ANRLKKEAGL HPRFRQFIIN IAQANHRFTT NVQRRIYGHS  60
TDVAIRPLNE EKAVQAAAEL LGELFVFTVA GTALIFEVQR SSRSEARKEE LRKQELQEDD  120
ATSPLKELLP TKPESDLQNL HLGNLVQFTE DFYVSPEPRE PQETFQEFYQ CGDTASGFQN  180
LMVDNSGFDH HFDFHQYVNE GPFLGGNDVK QPEEHAAPSV LPVISPAEPS FLGPTCALWD  240
CSRPVECGKD YCCNFHATSA LEEGQPGKSP VFRPRGISLK DNALFDALIA WNQGKAVGIP  300
NCEGAATLKS PWNDSKLFNL SFLEGETVRE WLFFDKPRRA FGTGNRRQRS LPDHSGRGWH  360
ESRKQIMKEF DGQKRSYYMD PQPSIDQDWH LFEYEVNNSD ACALYRLELK FGIVKKSPKG  420
KVSNEVADLQ KKMGKLTAEV ATDGANNAKG KTKKKADAGN IFSSQSPMTS TP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42400.11e-104VOZ family protein