PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000758.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 431aa MW: 49280.9 Da PI: 4.2632

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000758.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	71.4	2.4e-22	15	149	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkrknr 76 pG rF P ++elv +yLk+ ++g+k++ + + ++d+y ePw++ +++k+ +k++yfF++++k ++t++r +r Rmu_sc0000758.1_g000005.1 15 LPGERFCPMEDELVLFYLKPLLSGEKVPGRNSvVFDCDLYGRqEPWEIWEAYKTrrpndlrLNKDIYFFTQHKKMSSTDSRIRR 98 589**********************88766549999996549**743333234333334588************** PP NAM 77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g+Wk + k+v+s +g++vglkk L++ ++ + ++ W++he+ l Rmu_sc0000758.1_g000005.1 99 TVGNGTWKGDDSGKPVKSLeTGRVVGLKKRLTYK--NEASVHNGCWILHEFYL 149 ****9999999988668999*****8..44555699*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MQQEFAMEES RGNQLPGERF CPMEDELVLF YLKPLLSGEK VPGRNSVVFD CDLYGRQEPW 60 EIWEAYKTRR PNDLRLNKDI YFFTQHKKMS STDSRIRRTV GNGTWKGDDS GKPVKSLETG 120 RVVGLKKRLT YKNEASVHNG CWILHEFYLD RSLRDKKQKV KDYVLCLLRK NGEPKTKIQK 180 KRKQREEEEV LENNYACDDG ENTNKEQEEL LEPQAKRQRN VPSIDYALVP MPSEEDAFAA 240 ELEETLPCFE DDNAPSEAEA IGFQGEENWG LQQLASEVQS GPSFGEDHGI FIPLPEEDFL 300 LEEMVEQMGM VEMEHLLVVN GATSNMEVAE ENLLNNTLLH TPASSLSAAY DGTDMPYLSM 360 ENGCIDSAGS NNVCGGSIDF QDGAYWPESL VEVLTEEQQK IADKDCSDWL ESISFSREED 420 NFLWSEVQWC L

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MQQEFAMEES RGNQLPGERF CPMEDELVLF YLKPLLSGEK VPGRNSVVFD CDLYGRQEPW  60
EIWEAYKTRR PNDLRLNKDI YFFTQHKKMS STDSRIRRTV GNGTWKGDDS GKPVKSLETG  120
RVVGLKKRLT YKNEASVHNG CWILHEFYLD RSLRDKKQKV KDYVLCLLRK NGEPKTKIQK  180
KRKQREEEEV LENNYACDDG ENTNKEQEEL LEPQAKRQRN VPSIDYALVP MPSEEDAFAA  240
ELEETLPCFE DDNAPSEAEA IGFQGEENWG LQQLASEVQS GPSFGEDHGI FIPLPEEDFL  300
LEEMVEQMGM VEMEHLLVVN GATSNMEVAE ENLLNNTLLH TPASSLSAAY DGTDMPYLSM  360
ENGCIDSAGS NNVCGGSIDF QDGAYWPESL VEVLTEEQQK IADKDCSDWL ESISFSREED  420
NFLWSEVQWC L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	174	183	PKTKIQKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-15	NAC family protein