PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000755.1_g000007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 30428.2 Da PI: 5.3009 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 54.8 | 3.2e-17 | 16 | 130 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 pG rF P ++elv +yLk+ g+ l + + + P+dL+ +k++yfF+++++ ++t++r +r++ +g+Wk Rmu_sc0000755.1_g000007.1 16 LPGERFCPMEDELVLFYLKPMFCGSCRWL----D--RGRACRPNDLR-----LNKDIYFFTQHKTMSSTDTRIRRTVGNGTWKG 88 589******************99987444....2..456789****7.....3579***************************9 PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+v+s +g++vglkk L++ + +a++ ++ W++ e+ l Rmu_sc0000755.1_g000007.1 89 DDSGKPVKSLeTGRVVGLKKRLTYKN-QASE-HNGCWILYEFYL 130 999999988668999********984.3333.6999*****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MQQQFAVEES RGNDQLPGER FCPMEDELVL FYLKPMFCGS CRWLDRGRAC RPNDLRLNKD 60 IYFFTQHKTM SSTDTRIRRT VGNGTWKGDD SGKPVKSLET GRVVGLKKRL TYKNQASEHN 120 GCWILYEFYL DPSLRDKKQK VEDYVLCLLR KNGEPKAKIK KRRKQREEED VLENNYACDD 180 GENTNKEQPQ AKRQRMGEQN GGLQHFVSEV QSGDDHGMLI PLPEEDFLWE EMLQQMGIGD 240 DHGIPEEDFL WEDILQQIGS N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 164 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 7e-13 | NAC family protein |