PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000703.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Trihelix

Protein Properties

Length: 339aa MW: 37464.4 Da PI: 10.0362

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000703.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.7	9.7e-16	36	119	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 +W++ v L+ea++ ++ +r+klk+++We+v++++ + + ++++qCk+k+e+++kry+ + +++ + s++p Rmu_sc0000703.1_g000004.1 36 EWSEGAVSSLLEAYEAKWVLRNRAKLKGHDWEDVARHVssraSCSKSPKTQTQCKNKIESMKKRYRSESATADG------SSWP 113 5***********************************854444455566679**************99997......4699 PP trihelix 81 yfdqle 86 ++ +l+ Rmu_sc0000703.1_g000004.1 114 LYPRLD 119 999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MEKEGNQDQN PSLLSNNLES PRSKPLIGSD RLKRDEWSEG AVSSLLEAYE AKWVLRNRAK 60 LKGHDWEDVA RHVSSRASCS KSPKTQTQCK NKIESMKKRY RSESATADGS SWPLYPRLDL 120 LLRGSGPPPP TAAAAATVVA AVATSPAPPQ QPPLSAPLAH HSNHALMLLE PSVPVSSPPQ 180 PPPPQPPPPH LGTAQNSYGS DGVDRDAKED GVGMKLSDHA SDKNPLEIDS STPALYSDKE 240 KLRSKRMKRK IEKKTRRRRE ELEIAESIRW LAEVVVRSEQ SRMDTMRDIE RMRVEAEAKR 300 GEMDLKRTEI IANTQLEIAR IFAAGVGKGV DSSLRIGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	1e-95	Trihelix family protein