PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000665.1_g000025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 203aa MW: 23374.7 Da PI: 9.6541 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.7 | 4.1e-13 | 111 | 195 | 2 | 91 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkl 84 ++ + +v+k l p++f+++ k +++++l++ d +Wev+ i+ +ks+ +++GW +Fv+ ngL+egD + F+l Rmu_sc0000665.1_g000025.1 111 SVQMCQTHVTKGP-LLTPRSFMRNTH-K-PKKVELQVGD---MVWEVNWIHpYQKSS--RFSGGWLRFVSHNGLQEGDLCDFEL 186 5677777888877.555*****5554.3.2445555554...99****977544444..489*********************9 PP -SS..SEE. CS B3 85 dgr..sefe 91 +++ + + Rmu_sc0000665.1_g000025.1 187 ISKtnEVAV 195 964233333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MGSCSRRRED EGSENPGFYK CVDYSVLSTG KLYIGHAKFN VEIYGLNRCN KMSKARKSDR 60 LLDDFDVIIV YSDSDSEIEF PREPVCRRKL SRRGRPRNLA TVNRSGNPCF SVQMCQTHVT 120 KGPLLTPRSF MRNTHKPKKV ELQVGDMVWE VNWIHPYQKS SRFSGGWLRF VSHNGLQEGD 180 LCDFELISKT NEVAVMNVSI RKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 5e-08 | B3 family protein |