PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000660.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 368aa MW: 41477.1 Da PI: 6.9868

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000660.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.7	2.5e-28	88	165	53	128
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +e+ewyfFs+r++ky++g+r+nra++sgyWka g+dk++l++ ++ +g+kk Lvfy+grap+g kt+W+m eyrl Rmu_sc0000660.1_g000020.1 88 FGEDEWYFFSPRERKYPNGERPNRAAASGYWKAAGSDKPILTScgISKRIGVKKALVFYTGRAPTGIKTEWIMVEYRL 165 3678************************************9766677*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MKAIILALDV VLKGHALCKG LHGKFLCRPT TVVYVYSFLC SEDMILEWMT IYQSGGSSFA 60 VAWFRDELDL IRKEALVGIG PVMEMALFGE DEWYFFSPRE RKYPNGERPN RAAASGYWKA 120 AGSDKPILTS CGISKRIGVK KALVFYTGRA PTGIKTEWIM VEYRLLDSTT KPSRSKGSMR 180 LDDWVLCRVQ QKGNTSKNTC NSQGSSPEYW SCLQRVEQTQ HASADLNTEM TNDFLYKDCT 240 LIASILAGQA PPISSVRFQR TNDGYEVGTN YKVNSTISIS TPGIISDTLK RKSTEEIIKE 300 NPFRLENNLA SKNSDEDLLP SKRLEENYIN SYNHNHSQNN ILEANPIDTT DYEELNEMAI 360 LGRYFAGI

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MKAIILALDV VLKGHALCKG LHGKFLCRPT TVVYVYSFLC SEDMILEWMT IYQSGGSSFA  60
VAWFRDELDL IRKEALVGIG PVMEMALFGE DEWYFFSPRE RKYPNGERPN RAAASGYWKA  120
AGSDKPILTS CGISKRIGVK KALVFYTGRA PTGIKTEWIM VEYRLLDSTT KPSRSKGSMR  180
LDDWVLCRVQ QKGNTSKNTC NSQGSSPEYW SCLQRVEQTQ HASADLNTEM TNDFLYKDCT  240
LIASILAGQA PPISSVRFQR TNDGYEVGTN YKVNSTISIS TPGIISDTLK RKSTEEIIKE  300
NPFRLENNLA SKNSDEDLLP SKRLEENYIN SYNHNHSQNN ILEANPIDTT DYEELNEMAI  360
LGRYFAGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	2e-47	NAC family protein