PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000650.1_g000022.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bHLH

Protein Properties

Length: 117aa MW: 13396.5 Da PI: 9.9407

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000650.1_g000022.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.9	6.6e-07	9	30	34	55
TTS-STCHHHHHHHHHHHHHHH CS HLH 34 pskKlsKaeiLekAveYIksLq 55 +s K +Ka++L +AveY+k+Lq Rmu_sc0000650.1_g000022.1 9 NSNKTDKASMLDEAVEYLKQLQ 30 6789*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 117 aa Download sequence
MLIWCLIPNS NKTDKASMLD EAVEYLKQLQ LQVQRGERKK QKKGETGRTE EAGKSKRREE 60 LLYFTDSRIC LLEQGTTLKT SFGPTAKIVA ASIHFMMSVL IHLTNKYQYQ NLTRGGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67110.1	7e-14	bHLH family protein