PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000645.1_g000043.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 176aa    MW: 19924.3 Da    PI: 6.511
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000645.1_g000043.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.36.6e-171054147
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               rg+ T++E++l+v+++ +lG++ W++Ia +++ gRt++++k++w++ 
  Rmu_sc0000645.1_g000043.1 10 RGNITPDEEDLIVRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 54
                               7999******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MNYLRPGIKR GNITPDEEDL IVRLHSLLGN RWSLIAGRLP GRTDNEIKNY WNTNRSKRLN  60
NAGSTERGVS SVEGQLKKDD RGCVAKVKVH QPKAIRVSAN SIIRNNNILA ELGHHDAEVS  120
NDLHDHKHFG EALVCENVMD FDVFIQGYEE YQQQLLKADQ DLDGVHLDSF VDSLLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.12e-31MYB family protein