PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000607.1_g000039.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 198aa MW: 21759 Da PI: 4.1167 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 22.8 | 1.5e-07 | 39 | 87 | 3 | 45 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHH CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVk 45 +R+t+ ++ql++L+el++ + p+ e+++e+ +l ++++++V+ Rmu_sc0000607.1_g000039.1 39 NRWTPAPDQLRILQELYYDkvLKCPTPEQIQEICLNLqqygQIEDKNVF 87 7****************96679***************999999999997 PP | |||||||
2 | Wus_type_Homeobox | 62.2 | 1.1e-20 | 37 | 88 | 2 | 52 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfy 52 +++RWtP p+Q++iL+ely+ + l+ P+ e+iq+i +L++yG+iedkNVf+ Rmu_sc0000607.1_g000039.1 37 TNNRWTPAPDQLRILQELYYdKVLKCPTPEQIQEICLNLQQYGQIEDKNVFF 88 679***************9868899**************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MEPRTLLLME LQAQQPTEEG GSIQAAGSSA NTPIRPTNNR WTPAPDQLRI LQELYYDKVL 60 KCPTPEQIQE ICLNLQQYGQ IEDKNVFFCS TDDGRSIDLN FGSTGSTSTD RSIDLNFGSR 120 VGYGVDGSIM EQRGEYHQEI ETLPLFPMHG ENVFGNMKTT SEGGSGYGYY SDGWDDNNGG 180 SCISLKLSLY SSGAADMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 1e-15 | WOX family protein |