PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000595.1_g000061.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 303aa MW: 32948.8 Da PI: 4.3171 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 24.6 | 4.2e-08 | 149 | 198 | 13 | 56 |
HHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 13 eeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 ++Leel+ + p+ e+ ++++ +l +++ ++ ++WFqN+ a ek Rmu_sc0000595.1_g000061.1 149 RVLEELYDDkgVKSPTVEQVQRITLQLkwygQIENKNAFYWFQNQSALEK 198 79*****96569********************************877665 PP | |||||||
2 | Wus_type_Homeobox | 64.3 | 2.4e-21 | 148 | 200 | 13 | 64 |
Wus_type_Homeobox 13 ikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++Leely+ +G+++P+ e++qrit +L+ yG+ie+kN fyWFQN+ a e+ k Rmu_sc0000595.1_g000061.1 148 MRVLEELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNAFYWFQNQSALEKLK 200 68******999************************************999877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MTTEILAALK VQEVNEAGPL PLGDHVPDID PTAREDSVCT EEAATNNEGP IGGTVAPEME 60 NDTDGGGSLQ VSQINEKTVE AEGPVLKSAL LAHGEPRVEF PDSPAAEGID QPIEDEETEE 120 AIHPFALVVR DPVAPLPPPP PTRFERLMRV LEELYDDKGV KSPTVEQVQR ITLQLKWYGQ 180 IENKNAFYWF QNQSALEKLK NNKLTSDVQV PKQRSGLVGG SINLNFGSTS SAGVGGSIME 240 QRGEDHQEVK TLPLFPMHSE DIFGNMKTTS NEGGGHGGDS YISLELSLSC EGKAKIRACW 300 WIH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11260.1 | 1e-14 | WOX family protein |