PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000546.1_g000016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 93aa MW: 10691 Da PI: 7.5136 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.4 | 7.9e-09 | 14 | 58 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WT+ +l+ +a +++ ++ +W +a+ +g ++t++++k ++ Rmu_sc0000546.1_g000016.1 14 CWTPKQNKLFERALALYDKDtpeRWQNVAKAVGGNKTAEEVKRHY 58 6*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 93 aa Download sequence |
MASSSLKKHD SNSCWTPKQN KLFERALALY DKDTPERWQN VAKAVGGNKT AEEVKRHYDI 60 LLEDLRQIES GRVPLPNYKS LVTTTTNVDE EER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 5e-38 | MYB_related family protein |