PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000533.1_g000061.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 374aa    MW: 43333.3 Da    PI: 4.2667
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000533.1_g000061.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.71.1e-23111521128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.....kvka....eekewyfFskrdkkyatgkr 73 
                                l pG rF P ++el+++yLk+kv++k+++ ++  i e+d+y   +Pw++ +     +  a    ++k++yfF++++kk+a+g+r
  Rmu_sc0000533.1_g000061.1  11 LLPGQRFCPMEDELLMFYLKPKVNSKEVPGKDDlICELDLYGDqDPWKIWErfegrR--AndlrKNKDLYFFTQKKKKTARGSR 92 
                                579************************8886666******97549****75355552..1334466799*************** PP

                        NAM  74 knr.atksgyWkatgkdkevlskkgel......vglkktLvfykgrapkgektdWvmheyrl 128
                                 +r + + g+Wk +   ke++  ++++       g kkt ++   ++ + +  +W+m ey+l
  Rmu_sc0000533.1_g000061.1  93 ISRtVGSGGTWKGQNAAKEIYLLDQNQqptttiLGFKKTYTYK--NKGSVHDGRWIMYEYEL 152
                                ***5555889***********9855554566668888888887..44455689*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MENGGYDGLL LLPGQRFCPM EDELLMFYLK PKVNSKEVPG KDDLICELDL YGDQDPWKIW  60
ERFEGRRAND LRKNKDLYFF TQKKKKTARG SRISRTVGSG GTWKGQNAAK EIYLLDQNQQ  120
PTTTILGFKK TYTYKNKGSV HDGRWIMYEY ELDESQLVHK KQVNKKDYVL CLLRKNDEQP  180
EKKRKRQEEE EMLGDSDQDD DGNDNLNIEE PQAKWQCLLP CAGNVATPSF DFAEAEKWFD  240
QQLSQPALLE PVQESGPTPL EAEPWPVALQ VDENMELEHF GVDQGAQSLE LAELEKWFKD  300
EFEAQPQLGE ENLEQKLAGD EMSGLQYHED ENLVQQMANL PNFFLEELMN DERPNTMEVG  360
DWNAANSDFE YLAF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165185KKDYVLCLLRKNDEQPEKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.16e-18NAC family protein