PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000530.1_g000034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 104aa MW: 12177.1 Da PI: 10.3197 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 84.1 | 3.4e-26 | 23 | 85 | 2 | 64 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltg 64 + +kdrhsk++T++g++d Rv l +++a++f+d+qd+LG+d++sk+++W +++ak+ i+el+ Rmu_sc0000530.1_g000034.1 23 TDRKDRHSKVYTAKGPKDHRVWLASHTAIQFYDMQDRLGYDRPSKAVDWVIKKAKAIIDELPP 85 679*********************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence |
MEYAGRKMGE SHNNLHHRTM TATDRKDRHS KVYTAKGPKD HRVWLASHTA IQFYDMQDRL 60 GYDRPSKAVD WVIKKAKAII DELPPWNPNC LLAFMKIMQL ALNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 1e-32 | TCP family protein |