PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000524.1_g000010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | Trihelix | ||||||||
Protein Properties | Length: 170aa MW: 19488 Da PI: 7.4993 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 29.3 | 2.2e-09 | 7 | 66 | 31 | 86 |
trihelix 31 Weevskkm...rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 W++v++ ++ qC++k+e+l+kry+++k+++++ sss +++f+ ++ Rmu_sc0000524.1_g000010.1 7 WDHVAASTasaTPSSQPKTTLQCRHKMEKLRKRYRAEKQRASRYpGRSSSSLWALFHLMD 66 666666664333334467788*********************9855778889*****998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MLSFIFWDHV AASTASATPS SQPKTTLQCR HKMEKLRKRY RAEKQRASRY PGRSSSSLWA 60 LFHLMDEMES DPDRGLDNGG EFSLKALNLM KFDGNGGWNG PIGGETTREA QRYAYNCMLF 120 LSKPLVLKPS STSATSLILY KLTKMEKTFE AFECHDEEEE NVVEETYYKY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44730.1 | 7e-10 | Trihelix family protein |