PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000507.1_g000017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 254aa MW: 27678.8 Da PI: 5.945 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 44.6 | 2.5e-14 | 43 | 102 | 4 | 57 |
-SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+t+t+ ql++L+ l++ + p+ e+++e+ +l ++++++V++WFqN +a++++ Rmu_sc0000507.1_g000017.1 43 RWTPTPAQLRILQGLYYDkgYKCPTPEHIQEICLHLkpygQIEDKNVFFWFQNLKARDRQ 102 9***************9645888**********************************996 PP | |||||||
2 | Wus_type_Homeobox | 91.6 | 7.2e-30 | 41 | 103 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 + RWtPtp Q++iL+ ly+ +G + P+ e+iq+i +L+ yG+iedkNVf+WFQN kaR+rqk Rmu_sc0000507.1_g000017.1 41 TIRWTPTPAQLRILQGLYYdKGYKCPTPEHIQEICLHLKPYGQIEDKNVFFWFQNLKARDRQK 103 67***************9889*****************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDLEGFSSFE VHLVRRPLLL LCLACTQAAR SSANTPIRST TIRWTPTPAQ LRILQGLYYD 60 KGYKCPTPEH IQEICLHLKP YGQIEDKNVF FWFQNLKARD RQKLKEFRKV RVGGSLDLNF 120 GSTSSTDDGR SIDLHFGSTG STGDDGSIDL TLGSRVGYGV DPNSFSPFNA NTSTISFGTT 180 GGQYFMERRG GDHQEVETLP LFPVHGEDVL GNPKTTSEEG SAYGYYSGGS GGYNSGSPVS 240 LELSLNPSGA TDLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 7e-21 | WOX family protein |