PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000338.1_g000013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 160aa MW: 18528.4 Da PI: 9.6298 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 37.6 | 3.9e-12 | 49 | 155 | 2 | 96 |
EEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHH.HHHH CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesg.rsWevkliyrkksgryvltkGWk.eFvk 70 +k+lt sd ++++rl +pk+ +++h + ++ +t++d + + e+ ++y+ +s++yvl+++Wk eFv+ Rmu_sc0000338.1_g000013.1 49 KKKLTVSDLGELSRLLVPKSLTQKHvlrfmnkslnervH--SSNGELVTVYDCDMkSKHELVFKYWPSSKSYVLQANWKkEFVN 130 69999***********************98887766431..225668899995554677888888*************737*** PP HHT--TT-EEEEEE-SS.SEE..EEEE CS B3 71 angLkegDfvvFkldgr.sefelvvkv 96 +LkegD + ++ d r s f v+++ Rmu_sc0000338.1_g000013.1 131 VRKLKEGDQIGLYWDARrSIF--VFSL 155 **********99987654555..6555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MAETLLFPSL FASTREEQHL PCALNQAEHR GLDLGLSLGS IDYDPWIIKK KLTVSDLGEL 60 SRLLVPKSLT QKHVLRFMNK SLNERVHSSN GELVTVYDCD MKSKHELVFK YWPSSKSYVL 120 QANWKKEFVN VRKLKEGDQI GLYWDARRSI FVFSLLKRAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 3e-24 | B3 family protein |