PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_sc0000294.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 157aa MW: 18198.5 Da PI: 9.5873 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.6 | 9.6e-12 | 68 | 120 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 k+ rr+ +NRe+ArrsR RKk +e L+e++ L+ eN++Lk++l ++++ Rmu_sc0000294.1_g000008.1 68 KKRRRMKSNRESARRSRWRKKRHLEDLKEEANRLKMENRELKNRLGLVAQKCY 120 8999******************************************9999997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 157 aa Download sequence |
MFTSAAMFFN GAEEAVEFQC PAQETWITAT IEELMSLLQE GNSNSNSGSP NSGSEGSNGR 60 GVYSLDEKKR RRMKSNRESA RRSRWRKKRH LEDLKEEANR LKMENRELKN RLGLVAQKCY 120 VTWRENERLE SESLALWARL SDLNQVLVAM QTMRSQY |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 68 | 89 | KKRRRMKSNRESARRSRWRKKR |
2 | 69 | 90 | KKRRRMKSNRESARRSRWRKKR |
3 | 70 | 91 | KKRRRMKSNRESARRSRWRKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22850.1 | 3e-21 | bZIP family protein |