PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000286.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 223aa    MW: 25265.5 Da    PI: 11.1053
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000286.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.51.2e-0588110123
                                EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                ++C++Cg+ Fs+   L  H+r+H
  Rmu_sc0000286.1_g000003.1  88 HECSICGREFSSGQALGGHMRRH 110
                                78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MKRTREEVVG VDMDKVLMLL SCRLETKFKR CSSTPNDVFE CKTCNRQFPS FQALGGHRAS  60
HKKPRTLMGS DQDPKSENKM AQSKPKKHEC SICGREFSSG QALGGHMRRH RTVNARFSAT  120
IPAGASVDGA SKMKIPILMR SNRKNAIFVP IRRRALRHRR TGLVILVWDC REAGLLDPCL  180
WFGLGRLRRR YVRCGMGEIA AIVRFGGVVV ATWLESDRQQ DCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.13e-28C2H2 family protein