PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000260.1_g000019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 690aa MW: 79459.1 Da PI: 6.4042 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 77.9 | 1.9e-24 | 69 | 160 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkl 81 ++Y+++A++ GFs+rk++s++s++ g i++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+v+++ Rmu_sc0000260.1_g000019.1 69 EYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgISQWYVSQF 151 69********************8888.******************************************998766789****** PP FAR1 82 eleHnHela 90 ++ HnHel Rmu_sc0000260.1_g000019.1 152 SNVHNHELL 160 *******96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 690 aa Download sequence |
MKPSNNIWIR RQQCPCGDWK CYIKYEGDDP TSVSSLHVKS EITSSSSSSE AVFTPYVGQI 60 FKTDDDAFEY YSNFARKNGF SIRKARSTES QNLGIYRRDF VCYRSGFNQP RKKANVEHPR 120 ERKSVRCGCD AKLYLTKEIV DGISQWYVSQ FSNVHNHELL EDDQVRLLPA YRKIQEADQE 180 RILLLSKAGF PVNRIVKVLE LEKGVQPGHL PFIEKDIRNF IRTCKKTVQD NDALLNEKRE 240 NDMLELLEAC KAMTERDPGF VYDYTIDENE KVENIAWSYG HSVRAYTVFG DVVAFDTTHR 300 SITYGLLLGV WFGIDNHGRA TFLGCVLLHD ESLHSFAWAL QAFMRFMRGR YPQTILTDID 360 SGLRDAIARE LPSTKHVICI WHILSKISSW FSLPLGPQYE NFKAEFDVLS HLESVEDFEH 420 QWNILAARYG LVSDKHIGLL YSSRESWSLS YIRGYFLART LTAEFSLALE SFLKRILNAQ 480 TCLQVFFEQV SIAANFGNQT REGMQYMNVK TGMPIEEHAR NILTPYAFSV LQHEIVLSVQ 540 YATTEMGSGS YLVRHYKKLD GECLVIWIPD DEQIHCSCKE FEHSGILCRH SLRVLVVKNY 600 FQLPEKYFLL RWRLESSLDS LADENAQISA DDCAESFNTL TASLLTESLV SKERFNYVHR 660 ELSSLLEHVR SMPVIEEYAV NMAGNSISDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |