PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000235.1_g000032.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 164aa    MW: 18265.4 Da    PI: 8.2387
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000235.1_g000032.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.8e-18767257
                               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               ++R+++t++q+++L+e++ +  ++p+ e+ ++++ +l    +++ ++V++WFqN++ +e++
  Rmu_sc0000235.1_g000032.1  7 STRWAPTTDQIRILKEFYDNgGKNPTPEQVQRITLQLkqygQVENKNVFYWFQNHKSRERQ 67
                               58*****************99**************************************97 PP
2Wus_type_Homeobox107.29.8e-35669265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRW+Pt++Qi+iL+e y++G ++P+ e++qrit +L++yG++e+kNVfyWFQN+k+Rerqk+
  Rmu_sc0000235.1_g000032.1  6 SSTRWAPTTDQIRILKEFYDNGGKNPTPEQVQRITLQLKQYGQVENKNVFYWFQNHKSRERQKK 69
                               689***********************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MHCRRSSTRW APTTDQIRIL KEFYDNGGKN PTPEQVQRIT LQLKQYGQVE NKNVFYWFQN  60
HKSRERQKKK LTSDVHVPMQ RSGLVGGSIN LNFGLTCSAG VGGSIMEQRG EDHQEIETLP  120
LFPMHGEDIF GNMKTTSEGG SGYGGGSRIS LELSLNSSGD ADMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-29WOX family protein