PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000233.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Trihelix

Protein Properties

Length: 293aa MW: 33103.5 Da PI: 9.6833

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000233.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.2	1e-18	20	108	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 +Wt++e + Li a+r+++ +lrr++lk ++W++v+++ + +++ qC++k+e+l+kr++++k+++++ + ss++++ Rmu_sc0000233.1_g000008.1 20 CWTQDEARSLILAYRDRWFALRRTNLKSADWDHVAAATaaeAPSSPPKTALQCRHKMEKLRKRFRAEKQRASGYPGRFSSSWAL 103 8**********************************96444444589*********************9999*** PP trihelix 82 fdqle 86 f+ ++ Rmu_sc0000233.1_g000008.1 104 FHLMD 108 998 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MSTVVTTALP TKPRRVPPPC WTQDEARSLI LAYRDRWFAL RRTNLKSADW DHVAAATAAE 60 APSSPPKTAL QCRHKMEKLR KRFRAEKQRA SGYPGRFSSS WALFHLMDEM ESGPDPGLDS 120 GGEFGGGFSL KARNLVKFNG NVGRDFSPDV DENSSFYSEA EDYVNQGFRP KSNGKTDVNL 180 KHSFRQHGDY GVDIRSDRDF VPAGFQPKSS GIVDGNAKRN VRFKEFDGYS CLSGSKFVEK 240 SSVVGIKRDM DPVEDLASSI MRLGEGFVRM EKMKMEMTME IEKMRMEMEL KRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	7e-27	Trihelix family protein