PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000171.1_g000035.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 307aa    MW: 34929.3 Da    PI: 10.8303
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000171.1_g000035.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.0002222248123
                                EEET...TTTEEESSHHHHHHHHHH.T CS
                    zf-C2H2   1 ykCp...dCgksFsrksnLkrHirt.H 23 
                                ++C+   +C++ Fs++  L++H ++ H
  Rmu_sc0000171.1_g000035.1 222 FPCKfkdICDQKFSQRKRLNKHEKNdH 248
                                7899999****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MVDYHEIQRR QVVFPSPSSK ELVLYKPETH HQENLQERLG EVVKDAIFEH ASAPHTPHFP  60
HSPFLQQIFT PFSKRERNLG LSSIAVAVSS ELLSQEDDVI VVSGGVHDVS GGGDQARIPV  120
AIRQTLLLLL MLWRTTLFLS SAMVTITLKT RLRSLLLTRL ERSRRIRIEW PWAHRPTSSP  180
LSVGTPTDVI TVVSGGGNKA GITAAIESSR KISKINRSQK SFPCKFKDIC DQKFSQRKRL  240
NKHEKNDHRN LMDEKQGLTK NNEVKDGQKK HKRHIKMGKG RKIGAEKKFR CPYPSFSRCF  300
LTEKNVN