PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000168.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 99aa MW: 11319 Da PI: 11.7777 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.5 | 1.7e-19 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed++l v+q+G g+W++ +++ g+ R++k+c++rw++yl Rmu_sc0000168.1_g000003.1 16 RGPWTPQEDKKLFAFVQQHGHGSWRSLPQKAGLQRCGKSCRLRWRNYL 63 89*********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence |
MGRQSNSTVA SPGIRRGPWT PQEDKKLFAF VQQHGHGSWR SLPQKAGLQR CGKSCRLRWR 60 NYLNPDIKRG NFSLQEDQTI ILLHALLGNR QLIAKLNLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.2 | 2e-44 | MYB family protein |