PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000159.1_g000041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 271aa MW: 30954 Da PI: 10.1919 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.6 | 5.2e-19 | 88 | 149 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 rr+R+t+t+eq+ Leel+++ ++p+a+++++ +++l +++ +++++WFqNrRa+e++ Rmu_sc0000159.1_g000041.1 88 RRSRWTPTPEQIVHLEELYRSaIKTPTAQQIRQVTARLrnygRVEGKNIFYWFQNRRARERQ 149 89******************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 103 | 2e-33 | 88 | 150 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 r+RWtPtpeQi Leely+s+++tP++++i+++ta+L++yG++e+kN+fyWFQNr+aRerqk Rmu_sc0000159.1_g000041.1 88 RRSRWTPTPEQIVHLEELYRSAIKTPTAQQIRQVTARLRNYGRVEGKNIFYWFQNRRARERQK 150 589***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MWTMMGSSSG CRDPNIRALP EYSIKAAYPQ PAVLLTPKLS STSNMTKIPL LPFHHHHQMV 60 PVTSNEKGRN SSDCSYSHKQ PAAAAAPRRS RWTPTPEQIV HLEELYRSAI KTPTAQQIRQ 120 VTARLRNYGR VEGKNIFYWF QNRRARERQK TRRELMSMHQ SDSKQQQQTL TNNTISCLRD 180 KESAGVDFVR CFEVEQQRTL PSFTLLTDQQ LASNKKSPRS SGLADSLAPG DIGGRMDEIQ 240 IQEYTLFGLG EVQRWSEIPP WGNFKYTPQT T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01500.1 | 1e-22 | WOX family protein |