PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000131.1_g000044.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NF-YC
Protein Properties Length: 268aa    MW: 29331.1 Da    PI: 4.1261
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000131.1_g000044.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC41.53e-131402211999
                      NF-YC  19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt.difdflvdivprd 99 
                                 elP  r+kki+k d d+++i +ea  l+s + +lf+  l+  s   a e+kr+ +k   i +a +r   + dflvd+ p +
  Rmu_sc0000131.1_g000044.1 140 LELPTGRVKKIMKLDRDINKINSEALHLVSCSAQLFLQFLAEASGEAAMEKKRKIVKLEHIRTAAKRHrATRDFLVDELPVQ 221
                                589**********************************************************99988762689*****99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MAEDETAATT PPQVEEEQDS TTVQPPREEE GEDASPIRPE SGEENAVPPE SDTAMIQAVS  60
GEENTQPQIE EEEGEPPVVE EDDAAMTRPE SSEENAVGSE SEEDNIAPIE IASEEENAAT  120
VQPLSEGEKA KANGLEPIRL ELPTGRVKKI MKLDRDINKI NSEALHLVSC SAQLFLQFLA  180
EASGEAAMEK KRKIVKLEHI RTAAKRHRAT RDFLVDELPV QSQPSDQKSA DRSRSRPVAD  240
NPAPAGTRRI DDFFSKPATK SPIEVEES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.11e-43NF-YC family protein