PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000112.1_g000027.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 211aa    MW: 23718.1 Da    PI: 10.4998
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000112.1_g000027.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP51.34.7e-16781402884
                        TCP  28 caarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssaseceaesssssasn 84 
                                +a++f+dLqd+LG+d++ k ++W +++ak+ai+el+           + ss   + + s  + ++n
  Rmu_sc0000112.1_g000027.1  78 TAIQFYDLQDRLGYDRPNKVVDWVIKKAKAAIDELPPWnpnsifvqkT-SS--PTVPISTAQDTQN 140
                                8************************************95655554421.11..1112222222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MQEENGGEPR QPPPQRNDVV LRCFSIGFGY KDCFFLHRQR NRGGSRPHSK GHRPEGPPQQ  60
GLHGQRPQGP PRPARRPTAI QFYDLQDRLG YDRPNKVVDW VIKKAKAAID ELPPWNPNSI  120
FVQKTSSPTV PISTAQDTQN ASLHFSMVEA PSSLSANRRG AMVGGSGVAE LVNQNSSNFL  180
QVRMVWRLKL LIFGYLQLLL IEVWLEAKVV C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.22e-17TCP family protein