PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000110.1_g000027.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 193aa    MW: 21561.1 Da    PI: 9.7328
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000110.1_g000027.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox521.2e-163090256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ +t++q+++L+el+     + p+ e+ ++++ +l    +++ ++V +WFqN+Ra+ek
  Rmu_sc0000110.1_g000027.1 30 NTRWLPTTDQIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVLYWFQNQRAREK 90
                               58*****************6579*************************************9 PP
2Wus_type_Homeobox93.91.5e-302993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNV yWFQN++aRe+ k+
  Rmu_sc0000110.1_g000027.1 29 SNTRWLPTTDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVLYWFQNQRAREKLKK 93
                               789****************999****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEPQNRHPTE DGGSNKAAES SPNMHCKQSN TRWLPTTDQI RILKELYDDK GVKSPTVEQV  60
QRITLQLKWY GQIENKNVLY WFQNQRAREK LKKKNLTSDV QVPKQRSGFV RGSINLNFGS  120
TSSADVGGSI MEQRGEDHQE IKTLPLFPMH SEDIFGNMKT TSDGGGGHGG GSHISLELSL  180
SCEGKAGKSF RSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-27WOX family protein