PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000051.1_g000016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | G2-like | ||||||||
Protein Properties | Length: 187aa MW: 19897.2 Da PI: 10.3179 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 83.9 | 1.7e-26 | 15 | 61 | 10 | 56 |
G2-like 10 LHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +H+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Rmu_sc0000051.1_g000016.1 15 IHRRFLHALQQLGGSHTATPKQIRELMKVDGLTNDEVKSHLQKYRLH 61 6********************************************97 PP | |||||||
2 | Myb_DNA-binding | 29.4 | 1.9e-09 | 16 | 59 | 9 | 48 |
HHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 + ++++a +qlGg t+k I + m g+t ++ks++qky+ Rmu_sc0000051.1_g000016.1 16 HRRFLHALQQLGGShtaTPKQIRELMKvDGLTNDEVKSHLQKYR 59 88**********99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MAAASGIQQC IYLLIHRRFL HALQQLGGSH TATPKQIREL MKVDGLTNDE VKSHLQKYRL 60 HTRRPTPTIH NNNNNNSNAQ APQFVVVGGI WVPPQDYNAA VAAANTAPGE AARVVAAANG 120 IYAPVASTPS TVTQVSPSAM HRPRPKKPEP SSHSEERASH SGEGRGHSNS TATSPSSTHT 180 PASPPVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68670.1 | 1e-35 | G2-like family protein |