PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000026.1_g000016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 178aa MW: 20225.1 Da PI: 4.1245 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.8 | 1.9e-14 | 12 | 86 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ee+ +yfF++r+k +++ k+ r++ sg+W+a+ +++ v + ++++vg+k+ + + g++p+ ++ W+m+ey++ Rmu_sc0000026.1_g000016.1 12 EEEEQPLYFFTHRKKLNPKAKKFDRKVGSGTWSAQYSKNVVAA-DDSVVGIKREFRYEGGSDPH-QNGAWLMQEYQI 86 3345577***************************998666666.999**********9999998.89********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MFHAQSISIM KEEEEQPLYF FTHRKKLNPK AKKFDRKVGS GTWSAQYSKN VVAADDSVVG 60 IKREFRYEGG SDPHQNGAWL MQEYQITSHS NDLVQKEGSN DDLVASADQP LFTTNDKLQT 120 VQVDETNISI ADCPNDTSYS YFDLEVEEFF GLTTDDIYDD DDCQFSSSEI QAFLACLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.3 | 1e-10 | NAC family protein |