PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8516769.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 422aa    MW: 46322.6 Da    PI: 7.1888
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8516769.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like22.52.5e-071203655
                    G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                               m+ + Lt+e+v+SHLQk+Rl
  Rmu_co8516769.1_g000001.1  1 MNEDKLTRENVASHLQKFRL 20
                               899****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MNEDKLTREN VASHLQKFRL YLKRISCVAN QQANMMAAIG SSDSSYLRMG SFNGVRNYHA  60
LTGPGQFNNT GFRSMPLNGM IGRVNTPAGL GQHCLPSSGS IKLGHGQHPS NSILDQGLFP  120
GNRNGSMFQG NLELDQRHSK GATSVRDLSA GINGTPVYPI PGGLSDAKLI VSRSSDAVGL  180
TDDLILRHPR DFEGGREYVN QSSLSVAPLK SEFSAPFLDH GRLNDSWSSA AQSSAFRSNS  240
FPSSNTRDNI PVVMSSQLRN CQFDVPSINS VSSQLQDPRT ELLIQPSAIS STAEQIIDSD  300
PTQGWVWMDH KQDSPYHHSD AISSSMNSLM PANIPVAFDQ NLDSKGTTLQ RNMDFNSIGQ  360
SNFLDPLHIK FDEVERSVEA SMNLKPGECN DKSAGKEMRR HQWEGDFNMR SGKIQNVVFF  420
AR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-21ARR-B family protein