PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8510707.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 374aa    MW: 42439.7 Da    PI: 6.7939
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8510707.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00041161177117
                                EEETTTTEEESSHHHHH CS
                    zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                                y+Cp+Cgk+++  + L+
  Rmu_co8510707.1_g000001.1 161 YVCPNCGKRYNALDALQ 177
                                9**********999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MSIEPFNRLV KLAARAFYDD ITTKGDNQPK TGRSDNRGIA VVVLDALSRR QWVREEDLAK  60
DLKLHSKQLR RTLRFFEEEK LVTRDHRKET AKGAKIFSAA VAATADGQQH TKEGEEKIKL  120
HTHSYCCLDY AQIYDVVRYR LHRMRKKLKD ELEDKNTVQE YVCPNCGKRY NALDALQLIS  180
LEDEYFHCES CNGELVAESD KLASQDVGDG DSNARRQRRE KLKDMLQNME VQLKPLMEQI  240
NRVKDLPAPE FGTLQAWEAR AHAQRRAENG ESSAMDPSKS SHGLGYGGTP MPFLGDTKVE  300
VDFGNEGKGN DVKSEADITG QKILPPWMIK QGMNLTKEQR GEVKQEAKMD GTLAAPEYSD  360
DKKSNAEDND KAFQ