PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8495863.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 378aa    MW: 41913 Da    PI: 4.826
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8495863.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.7e-103033431055
                                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Rmu_co8495863.1_g000001.1 303 RKRRERINERLRVLQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 343
                                9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MESLGVFAEG DQWECFSRLF SNEDQELDFT PHFLGHEGSF PFQHNEGFNF DTPTTLFPNP  60
EAGDEMGLNR FNQSFFHSLD SLSSNMHYLP QENNSGYSAS SGIFTAILNP ENYYFGGNSC  120
HTPMSNDIST SVDVSMTGNT ESNFGSFIPS FSDIGMEGAV CNTEYSGSGR KGFSDDSQPP  180
KELQLKRMHD AAAEKSNTKD ASESNPKKKP RLLKDKTKKS NARSKKGQKA NSDLEVKDED  240
ESNTGVDRQS SSSYNSSEDD NASQETNGAG EISDPKSSSA LNLNGKTRAN RGSATDPQSL  300
YARKRRERIN ERLRVLQNLV PNGTKVDIST MLEEAVHYVK FLQLQIKLLS SDDMWMYAPI  360
AYNGMDIGLD LHKMSPLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-47bHLH family protein