PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8485709.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 184aa MW: 20332.9 Da PI: 6.5056 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.8 | 1.2e-15 | 69 | 163 | 6 | 98 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkld 85 +++ ++++++ ++ +fa+eh k+ s ++l++++ r+W+ ++ ++ +s++ + + GWk F ++n+L gD++vF+l+ Rmu_co8485709.1_g000001.1 69 MTAAYMRLSLAHISASFAAEHLCKPGISCNVILQNSEERVWTAQCFVSEHSDHrvqaSLSGPGWKAFKQDNHLVLGDVCVFELI 152 566677777889*********777889999***************88666655555577779********************99 PP SSSEE..EEEEE- CS B3 86 grsefelvvkvfr 98 + e++l+v++f+ Rmu_co8485709.1_g000001.1 153 D--ERKLKVSIFQ 163 7..5667999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MEIDYPIHGG GIDVTPKGKK PGANQDVPPA HLEARANSVS SGSSADEDQN NLLTTTSFKS 60 DKPIFMLNMT AAYMRLSLAH ISASFAAEHL CKPGISCNVI LQNSEERVWT AQCFVSEHSD 120 HRVQASLSGP GWKAFKQDNH LVLGDVCVFE LIDERKLKVS IFQGKVKIIR QNEENEARHI 180 SQFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-10 | B3 family protein |