PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8480485.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | G2-like | ||||||||
Protein Properties | Length: 178aa MW: 19809.3 Da PI: 10.0609 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.1 | 9.3e-29 | 127 | 176 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ Rmu_co8480485.1_g000001.1 127 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQ 176 9************************************************* PP | |||||||
2 | Myb_DNA-binding | 44.9 | 2.8e-14 | 128 | 176 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q Rmu_co8480485.1_g000001.1 128 RMRWTTTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQ 176 89**********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MRTTSSPLPD LSLQISPPSD HYEMGLARKA LNGDRSSTTD STSSGSDLSH ENVLYHLDQR 60 TNYNLTSAEP EPNLSLGLEM KDIISSSTSS TPLLPRNFNH HHPQIYGRDF KRSARTVGNV 120 KRSVRAPRMR WTTTLHAHFV HAVQLLGGHE RATPKSVLEL MNVKDLTLAH VKSHLQVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42630.2 | 3e-46 | G2-like family protein |