PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8429197.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 159aa MW: 18477.5 Da PI: 10.1596 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 57.9 | 3.5e-18 | 7 | 134 | 1 | 120 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykv.ePwdLpk.....kvka....eekewyfFskrdkkyatgkr 73 l pG rF P ++el+++yLk+kv+g +++ e+vi e+d+y + w++ + + a ++k++yfF++++kk+a+++r Rmu_co8429197.1_g000001.1 7 LLPGQRFCPMEHELLMFYLKPKVNGMEVPGnEDVICEMDLYGDqDSWKIWErfearR--AndlrRNKDLYFFTQKKKKTARSTR 88 579************************7762467******975489***64344442..1345466799*************** PP NAM 74 knratksgy.WkatgkdkevlskkgelvglkktLvfykgrapkgektd 120 ++r++ sg Wk + ke++ + L f r+p++++t+ Rmu_co8429197.1_g000001.1 89 TSRTVGSGCtWKGQNAAKEIYL-LL-IRISSQHLLFLVSRKPTPTRTK 134 ***8888766***********9.44.4444555666667888877775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MDGGCMLLPG QRFCPMEHEL LMFYLKPKVN GMEVPGNEDV ICEMDLYGDQ DSWKIWERFE 60 ARRANDLRRN KDLYFFTQKK KKTARSTRTS RTVGSGCTWK GQNAAKEIYL LLIRISSQHL 120 LFLVSRKPTP TRTKTLCIMF AGSCRSLNLI SHNSYTRNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-08 | NAC family protein |