PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8428107.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 277aa MW: 32279.1 Da PI: 4.5966

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8428107.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	37	1e-11	9	83	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 e + +yf++kr k++++gkr r++ sg+W+ +++ + + +++++g+ + + + kg +g++ W+mhey+ Rmu_co8428107.1_g000001.1 9 EGEPLYFYTKRIKQNSNGKRFARKVGSGTWSGEYSKEVLAADdGKTKIGTMRNFRYEKG-CDSGQNGAWLMHEYES 83 45678************************8877555444467788****9865.55789*******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MYGGSTYEEG EPLYFYTKRI KQNSNGKRFA RKVGSGTWSG EYSKEVLAAD DGKTKIGTMR 60 NFRYEKGCDS GQNGAWLMHE YESEFDKNGE DDYVICVLRK NPRKAPALLQ PDQRDIESTK 120 KSSVNDKKRK RMKSDDVVDH QDHQQRKLEK QQKDDRELIK IEEEERKEES YDEQGRSSCT 180 QLPYHHDQDN NIDYPDNHNF YLDYYFPELL GNNYDDGVTI DELIGPISDD SVYYKSIPFQ 240 DQLYHGDDDS FNFVDYSDGG VSQLPNDQHT VDYLGNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	150	KKRKRMKSDDVVDHQDHQQRKLEK
2	128	151	KKRKRMKSDDVVDHQDHQQRKLEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62380.1	1e-08	NAC family protein