PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_co8417033.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 149aa MW: 17296.3 Da PI: 5.3711 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.8 | 2.3e-13 | 18 | 74 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++k+ +++q+NRe+ArrsR +K++++eeL+ ++ L+ N + ++ ++ k ++++ Rmu_co8417033.1_g000001.1 18 DDKKRKKMQSNRESARRSRMKKQKRVEELTVEISRLQISNGQIRQSIDAKDKAYSEV 74 589******************************************999988887765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 149 aa Download sequence |
MSSVQRQSSS GSDGSVVDDK KRKKMQSNRE SARRSRMKKQ KRVEELTVEI SRLQISNGQI 60 RQSIDAKDKA YSEVEAWNNV MRAQEKELTD RLRYLESIEQ KFVEFSGVFD EDINNDMAEM 120 HDSLLNPWQL PYSTQPITAS SADMFLDWP |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 20 | 24 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G62420.1 | 3e-34 | bZIP family protein |