PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8412195.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family LBD
Protein Properties Length: 164aa    MW: 18477.9 Da    PI: 6.772
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8412195.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26024.95.5e-081494593
                     DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
                               ++k+++  +r+++++slv+eA +r++dPv G +g ++ +  +l+  k++
  Rmu_co8412195.1_g000001.1  1 MVKNANVANRRKVVDSLVWEALCRQKDPVLGPYGEYRMIFDELKMYKNH 49
                               678889999*************************999988888877764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MVKNANVANR RKVVDSLVWE ALCRQKDPVL GPYGEYRMIF DELKMYKNHE NQTVPLQVQK  60
GMCYKSVTDL VAWNYETNGI SDGINGGNGI TTTNNNLDYD LQVNENVRIN SVPPYGYPLT  120
CEQEIAAEKI KQVKIAADSI AVPVVHQQGH SINNINQQYY ISGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.16e-15LBD family protein