PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8395735.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 259aa MW: 28886.4 Da PI: 9.0091 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 45.1 | 1.7e-14 | 158 | 250 | 11 | 99 |
HHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 11 lksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 k +l+l+ + ++ g k+ +++ l++ ++ W+v+++y+ + ++ l++GW++Fv+ n+L++gD++ F+l+++ + Rmu_co8395735.1_g000001.1 158 IKGTMLWLSAEISMNMltylG-KNSGNVSLSVSEgSTRGLWTVEMKYDTERATFRLQSGWNKFVQGNNLNAGDVCGFMLIDEIG 240 555555555555433355543.333444455544244489****************************************9977 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 + v +fr+ Rmu_co8395735.1_g000001.1 241 LLFEVNIFRR 250 7789999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
WEVEVTGHNG HFWFEKGWED FSKFYSLQSH DSLAFQYEAN SRFKVNIFDK SKTEIDYPIK 60 SPNMQENGVN DHSPPASPPL PQKKRGATSS GGKKDLSAEK DEGGKSSTTQ RSQKPTTEVP 120 MRMHSSATGG KATALQRAKE FKSRNPSCFL VIMHASYIKG TMLWLSAEIS MNMLTYLGKN 180 SGNVSLSVSE GSTRGLWTVE MKYDTERATF RLQSGWNKFV QGNNLNAGDV CGFMLIDEIG 240 LLFEVNIFRR TEVATSSPG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 7e-21 | B3 family protein |