PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8388259.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 150aa    MW: 16966.6 Da    PI: 6.5519
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8388259.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-192375156
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               ++y+G+r+++ +g+++AeIrdps ng  +r +lg+f taeeAa+a+++a+  ++g+
  Rmu_co8388259.1_g000001.1 23 TRYRGIRRRP-WGKYAAEIRDPSRNG--ARLWLGTFETAEEAARAYDRAAFGFRGH 75
                               68********.**********98887..**********************988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MEGERAESNE RKSKQPIKVR DQTRYRGIRR RPWGKYAAEI RDPSRNGARL WLGTFETAEE  60
AARAYDRAAF GFRGHLAILN FPNEYQYHNP STSSFVTSNS VSSSSSTSSN SFSSAPADGG  120
MDFGNKEGPV IEFEYLDNMV LEELLEEQKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-31ERF family protein