PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8386149.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | E2F/DP | ||||||||
Protein Properties | Length: 85aa MW: 8871.15 Da PI: 10.2678 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 28.3 | 3e-09 | 51 | 84 | 1 | 34 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeL 34 r ++sL+llt+kf++l++++e+gi++ln++a++L Rmu_co8386149.1_g000001.1 51 RFDSSLGLLTKKFINLIKQAEDGILDLNKAAETL 84 6789****************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence |
MIQSPLQTPV STTKAGKTNN RTKVSKGKSG PQTPASNAGS PCPLTPAGSC RFDSSLGLLT 60 KKFINLIKQA EDGILDLNKA AETLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36010.1 | 4e-31 | E2F/DP family protein |