PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8371689.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 155aa MW: 17580.9 Da PI: 10.3223 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72 | 1.6e-22 | 2 | 72 | 57 | 126 |
NAM 57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmhey 126 ew+fF++++ ky++++r+nr+tk+gyWk tg+++ ++++ +++++g k+tL+fy+grapk++kt+Wv+h Rmu_co8371689.1_g000001.1 2 EWFFFTRKAYKYNKSSRSNRSTKKGYWKITGNERGITARrSKSVIGKKRTLTFYQGRAPKSKKTSWVIHGH 72 8************************************99566779***********************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MEWFFFTRKA YKYNKSSRSN RSTKKGYWKI TGNERGITAR RSKSVIGKKR TLTFYQGRAP 60 KSKKTSWVIH GHYLPGDGVA SYPKQAQGDF VICLLKIRSD KKDSPVSNEG EPRSTSVSEM 120 NQEGNEKLLF HQPQPLDDCC SSALQSPVSQ ELEAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 2e-19 | NAC family protein |