PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8370125.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 135aa MW: 15220.3 Da PI: 8.3284 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.9 | 3.4e-17 | 21 | 114 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvv 81 f+k++++ + + s l +p +f +eh + +++++l++++g+ W+v+ + k++ +++ +GW Fv+ n+++ gD+++ Rmu_co8370125.1_g000001.1 21 FVKIMKKFNISGSYTLKIPYQFSTEHlpN----YKTEIVLRNSKGECWTVNSVPDSKGRVvHTFCGGWMAFVRGNDVNIGDICI 100 778888888888899***********533....3468***************5544444379999******************* PP EEE-SSSEE..EEEEE CS B3 82 Fkldgrsefelvvkvf 97 F+l+g ++e++v++ Rmu_co8370125.1_g000001.1 101 FELVG--KREMRVHIS 114 **998..555677765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MRLTLDEEKA ARSFTSCFPN FVKIMKKFNI SGSYTLKIPY QFSTEHLPNY KTEIVLRNSK 60 GECWTVNSVP DSKGRVVHTF CGGWMAFVRG NDVNIGDICI FELVGKREMR VHISGADKNG 120 FDHQGGEATT NAEYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 7e-13 | B3 family protein |