PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8359043.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | bHLH | ||||||||
Protein Properties | Length: 102aa MW: 11410.6 Da PI: 9.9057 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.2 | 9.4e-11 | 73 | 100 | 3 | 30 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 3 rahnerErrRRdriNsafeeLrellPka 30 ++h+++E+rRRdriN +++Lr+l+P++ Rmu_co8359043.1_g000001.1 73 KSHSQAEKRRRDRINAQLATLRKLIPQS 100 79************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MEKCYSAEGP NWVNQHQTAT AVSNESSSFQ VPWPHVSHVS KPTQFQFSGR FPPSWSSTAE 60 GIAEEDRAAS ASKSHSQAEK RRRDRINAQL ATLRKLIPQS DK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 4e-12 | bHLH family protein |