PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8325249.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | GRAS | ||||||||
Protein Properties | Length: 205aa MW: 22912.4 Da PI: 6.3903 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 217.9 | 5.3e-67 | 1 | 180 | 193 | 374 |
GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276 +L+v p+Ea+aVn+++qlhrll ++ + +s+++ +L +++l+Pk+v+vveqeadhn++ Flerf+eal+yys +fdslea Rmu_co8325249.1_g000001.1 1 MLQVGPKEAVAVNSIMQLHRLLGSDSNRNSPIEMMLGWIRNLNPKIVTVVEQEADHNKAGFLERFTEALYYYSNMFDSLEAC-- 82 6999***************************************************************************998.. PP GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360 + + ++++ +++++rei+nvv+ceg +r+erhe l+kWr rle aGF+p++l+++a kqa++ll ++ +gyrvee++g+l+l Rmu_co8325249.1_g000001.1 83 GAMQPDKTLAEMYIQREICNVVCCEGLARVERHEPLSKWRIRLELAGFSPLHLGSNAFKQASMLLTLFSAEGYRVEEKEGCLTL 166 4567788888899*********************************************************************** PP GRAS 361 gWkdrpLvsvSaWr 374 gW++rpL+++SaW+ Rmu_co8325249.1_g000001.1 167 GWHSRPLIAASAWQ 180 *************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MLQVGPKEAV AVNSIMQLHR LLGSDSNRNS PIEMMLGWIR NLNPKIVTVV EQEADHNKAG 60 FLERFTEALY YYSNMFDSLE ACGAMQPDKT LAEMYIQREI CNVVCCEGLA RVERHEPLSK 120 WRIRLELAGF SPLHLGSNAF KQASMLLTLF SAEGYRVEEK EGCLTLGWHS RPLIAASAWQ 180 VMPLPEATAT ATNPLGIVNH SANHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 1e-69 | GRAS family protein |