PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8321009.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 271aa    MW: 28821.9 Da    PI: 8.5971
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8321009.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012107129123
                                EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                ykC+ C+k+F++   L  H  +H
  Rmu_co8321009.1_g000001.1 107 YKCSVCDKTFPSYQALGGHKASH 129
                                9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MALEALNSPT AAGQGFHYDE PKLQYSEPWT KRKRSKRPRS VEQSQQTQVS EEEYLAICLI  60
MLARGGHSGG PITAAASHRS QSPVPSVSPV IEQATSAPAK ENQLPSYKCS VCDKTFPSYQ  120
ALGGHKASHR KGSSAVTGGE GPSTSSTTTT TSAATVSNAS GRSHECSICH KSFPTGQALG  180
GHKRCHYEGG ATATRSAATT SAVTTSEGVG STTHTVSQSH QHREAFDLNL PAFPEPLSRN  240
FFLSGDDEVE SPHPTKKPRL FMTPKVEISL N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.18e-43C2H2 family protein